Glob Struct Reference

#include <def.h>

List of all members.

Public Attributes

int noGnu
 Flag: TRUE turns GnuPlot animation off.
int noMeasurements
int wait
 Flag: TRUE for waiting after each iteration.
int usesig
 Flag: TRUE for using variances from datafile.
int integrator
 Integrator selection.
int stiff
int nowait
 Flag: TRUE to prevent waiting after last iteration.
int reg
 Flag: TRUE for turning automatic regularisation on.
int simInit
 Flag: TRUE for using simulation based data for initialisation.
int nodamp
 Flag: TRUE for suppress damping.
long npar
 Number of parameters.
long maxit
 Maximal number of iterations.
long nIter
 Iteration counter.
int nrExp
 Number of experiments.
int * doP
 Fix and local parameters definition vector.
double ** covar
 Covariance matrix of parameters.
double chisq
 Current chi-square.
double eps
 Integration accuracy.
long rkqs_ign
 Controls the integration of the variational differential equations.
int maxstp
 Maximal number of integration steps (Runge-Kutta).
double minimp
 Minimal improvement of parameters.
double elastic
 Factor for weakening the continuity constraints.
double epsilon
double lambda
double dt
 Sampling for simit.
double sig
 Relative Gaussian for simulations.
double pert
 Perturbation of the simulated initial guess in %.
int * y0fix
 Fix initial values.
double wquer
 Controls damping.
FILE ** gnuFp
 File pointer vector for GnuPlot animation.
long ngnu
 Number of GnuPlot windows.
long gnuindex
 Index of the current GnuPlot window.
long fitdim
int initSpline
 Flag: TRUE if splines should be initialised.
int fitConverged
 1 if fit is converged, 0 else
double cond
double Lambda
int silent
int strategy
int minimiser
int faktorLexist
double * faktorL


Detailed Description

Definition at line 199 of file def.h.


Member Data Documentation

double Glob::chisq
 

Current chi-square.

Definition at line 244 of file def.h.

Referenced by dampIt().

double Glob::cond
 

Condition number of the liniearised system to be solved

Definition at line 296 of file def.h.

double** Glob::covar
 

Covariance matrix of parameters.

Matrix of dimension:

\[ {\bf npar} \times {\bf npar}\]

Definition at line 242 of file def.h.

Referenced by outFit().

int* Glob::doP
 

Fix and local parameters definition vector.

TRUE : Fit parameter
FALSE : Fix parameter
'L' : Local Parameter

Vector of dimension:

\[ {\bf npar}\]

Definition at line 237 of file def.h.

Referenced by initialise(), mexFunction(), Norm(), parseopts(), and tabulateValues().

double Glob::dt
 

Sampling for simit.

Definition at line 261 of file def.h.

Referenced by mexFunction(), and parseopts().

double Glob::elastic
 

Factor for weakening the continuity constraints.

\[{\bf elastic}\in (0,1] \]

Definition at line 257 of file def.h.

Referenced by condense(), decondense(), mexFunction(), and parseopts().

double Glob::eps
 

Integration accuracy.

Definition at line 246 of file def.h.

Referenced by mexFunction(), parseopts(), and tabulateValues().

double Glob::epsilon
 

Definition at line 258 of file def.h.

Referenced by mexFunction(), and parseopts().

double* Glob::faktorL
 

Definition at line 312 of file def.h.

Referenced by parseopts().

int Glob::faktorLexist
 

Definition at line 311 of file def.h.

Referenced by parseopts().

int Glob::fitConverged
 

1 if fit is converged, 0 else

Definition at line 292 of file def.h.

long Glob::fitdim
 

Total number of fitted variables, needed for the covariance matrix

Definition at line 288 of file def.h.

FILE** Glob::gnuFp
 

File pointer vector for GnuPlot animation.

Definition at line 280 of file def.h.

Referenced by freeMem(), mexFunction(), and parseopts().

long Glob::gnuindex
 

Index of the current GnuPlot window.

Definition at line 284 of file def.h.

int Glob::initSpline
 

Flag: TRUE if splines should be initialised.

Definition at line 290 of file def.h.

Referenced by mexFunction(), and parseopts().

int Glob::integrator
 

Integrator selection.

Definition at line 210 of file def.h.

Referenced by mexFunction(), parseopts(), and tabulateValues().

double Glob::Lambda
 

Actual damping parameter (not to be confused with lambda)

Definition at line 300 of file def.h.

double Glob::lambda
 

Definition at line 259 of file def.h.

Referenced by mexFunction(), and parseopts().

long Glob::maxit
 

Maximal number of iterations.

Definition at line 224 of file def.h.

Referenced by mexFunction(), and parseopts().

int Glob::maxstp
 

Maximal number of integration steps (Runge-Kutta).

Definition at line 250 of file def.h.

Referenced by integrateRK(), mexFunction(), parseopts(), and tabulateValues().

int Glob::minimiser
 

Definition at line 309 of file def.h.

Referenced by mexFunction(), and parseopts().

double Glob::minimp
 

Minimal improvement of parameters.

Definition at line 252 of file def.h.

Referenced by fitIt(), mexFunction(), and parseopts().

long Glob::ngnu
 

Number of GnuPlot windows.

Definition at line 282 of file def.h.

long Glob::nIter
 

Iteration counter.

Definition at line 226 of file def.h.

Referenced by globOpt().

int Glob::nodamp
 

Flag: TRUE for suppress damping.

Definition at line 219 of file def.h.

Referenced by mexFunction(), and parseopts().

int Glob::noGnu
 

Flag: TRUE turns GnuPlot animation off.

Definition at line 203 of file def.h.

Referenced by mexFunction(), and parseopts().

int Glob::noMeasurements
 

Definition at line 204 of file def.h.

Referenced by mexFunction(), parseopts(), and setMesh().

int Glob::nowait
 

Flag: TRUE to prevent waiting after last iteration.

Definition at line 213 of file def.h.

Referenced by mexFunction(), and parseopts().

long Glob::npar
 

Number of parameters.

Definition at line 222 of file def.h.

Referenced by call_odessa(), computeRight(), condense(), decondense(), freeMem(), initialise(), intODE(), mexFunction(), Norm(), outFit(), parseopts(), solvLin(), subIt(), and tabulateValues().

int Glob::nrExp
 

Number of experiments.

Definition at line 228 of file def.h.

Referenced by condense(), decondense(), fitIt(), fitness(), freeMem(), globOpt(), initialise(), main(), mexFunction(), Norm(), outFit(), parseopts(), setupGnuFp(), solvLin(), and subIt().

double Glob::pert
 

Perturbation of the simulated initial guess in %.

Definition at line 265 of file def.h.

Referenced by mexFunction(), and parseopts().

int Glob::reg
 

Flag: TRUE for turning automatic regularisation on.

Definition at line 215 of file def.h.

Referenced by mexFunction(), and parseopts().

long Glob::rkqs_ign
 

Controls the integration of the variational differential equations.

Definition at line 248 of file def.h.

Referenced by tabulateValues().

double Glob::sig
 

Relative Gaussian for simulations.

Definition at line 263 of file def.h.

Referenced by mexFunction(), outSimit(), and parseopts().

int Glob::silent
 

Relaxiation Parameter

Definition at line 303 of file def.h.

Referenced by dampIt(), mexFunction(), and parseopts().

int Glob::simInit
 

Flag: TRUE for using simulation based data for initialisation.

Definition at line 217 of file def.h.

Referenced by mexFunction(), and parseopts().

int Glob::stiff
 

Definition at line 211 of file def.h.

Referenced by mexFunction(), parseopts(), and tabulateValues().

int Glob::strategy
 

if silent=1 no shell output is printed

Definition at line 307 of file def.h.

Referenced by outFit(), and parseopts().

int Glob::usesig
 

Flag: TRUE for using variances from datafile.

Definition at line 208 of file def.h.

Referenced by mexFunction(), and parseopts().

int Glob::wait
 

Flag: TRUE for waiting after each iteration.

Definition at line 206 of file def.h.

Referenced by mexFunction(), and parseopts().

double Glob::wquer
 

Controls damping.

Definition at line 276 of file def.h.

Referenced by dampIt(), mexFunction(), and parseopts().

int* Glob::y0fix
 

Fix initial values.

TRUE : Fit initial value
FALSE : Fix initial value

Vector of dimension:

\[ {\bf nvar}\]

Definition at line 273 of file def.h.

Referenced by decondense(), fitness(), outFit(), parseopts(), and solvLin().


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